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Metabolic Pathways
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Graphical and hypertext-based information on biochemical pathways, including metabolic and regulatory pathways (for instance, cell cycle and growth factor signaling).
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KEGG: Kyoto Encyclopedia of Genes and Genomes A grand challenge in the post-genomic era is a complete computer representation of the cell, the organism, and the biosphere, which will enable computational prediction of higher-level complexity of cellular processes and organism behaviors from...Graphical representation of metabolic pathways that are crucial to human metabolism, including 3D depictions from the George Washington University, Washington, DC.
http://www.gwu.edu/~mpb
Links to enzyme, metabolic and signaling pathways databases from the Bioinformatics Unit at Weizmann Institute of Science, Israel.
http://bioinformatics.weizmann.ac.il/mb/db/enzymes.html
The Ubiquitin System for protein modification and degradation.
http://www.ccc.nottingham.ac.uk/...mbzmail/students/ub/ubindex.html
Non-profit organization dedicated to the study of plant anatomy and physiology, established by Dr. Jim Bidlack, Edmond, OK.
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Metabolism Foundation You Are Visitor Number...Diagram of steps in Krebs' tricarboxylic acid cycle, with 3D presentation dependent on Chime plug-in, from student at University of North Texas.
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Citric Acid Cycle The others are glycolysis and electron transport/oxidative phosphorylation. The big picture: Glycolysis breaks 1 glucose into 2 pyruvate, producing 6 ATP. Pyruvate is used to make acetyl-CoA, the starting product for the citric acid cycle....Discusses the conversion of glucose and other monosaccharids to lactate or other biproducts, depending on the organism. Includes an advertisement for the webmaster's book.
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Jon Maber's Biochemistry Pages The requested resource has moved to a different web address. If you are responsible for the page that linked to this one please update it. http www.beechtreecommon.org/biochemistry/...Lists and describes microbial pathways for the enzymatic degradation of numerous synthetic compounds. Hosted by the University of Minnesota.
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Microbial biocatalytic reactions and biodegradation pathways primarily for xenobiotic, chemical compounds UK mirror UK Stats KEGG mirror KEGG Stats UM-BBD Main Menu Search About the UM-BBD What's New FAQs Join Email List Contributors Guided Tour...Description of over 450 metabolic pathways and their associated enzymes, from over 150 organisms maintained by SRI International, Menlo Park, CA.
http://biocyc.org/metacyc/
Studies on squalene monooxygenase dependent cholesterol biosynthesis, and the role of cytochrome P450 reductase as the electron transfer partner, by Todd D. Porter's group at the College of Pharmacy, Lexington, KY.
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Porter Laboratory Research Projects My laboratory is interested in the regulation and activity of enzymes involved in cholesterol synthesis. We use biochemical and recombinant DNA techniques to express and characterize these enzymes and associated proteins in E. coli and...Chapter from the biology hypertext book at MIT, Cambridge, MA.
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Glycolysis and the Krebs Cycle We did not explicitly develop glycolysis and energy metabolism pages, but there is a wealth of good information on these topics that other people have developed, and this directory allows to to get to those...Overview of the biology, enzymology, and structure of cytochrome P450 reductase, an unusual electron transfer flavoprotein.
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CYTOCHROME P450 REDUCTASE These oxygenases include the cytochromes P450, a family of enzymes involved in the metabolism of many drugs and dietary substances, and in the synthesis of steroid hormones and other extracellular lipid signaling molecules; heme oxygenase,...A survey of human metabolism, written for undergraduates in the Health Sciences from a chemist's point of view. Includes profile of author at University of Oporto, Portugal.
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A general overview of the major metabolic pathways A general overview of the major metabolic pathways Prof. Doutor Pedro Silva Assistant Professor, Universidade Fernando Pessoa Metabolism is the set of chemical rections that occur in a cell, which enable it to keep living,...Protein degradation resource.
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How does the cell know which proteins to degrade, and when? CAUTION Some of the links here are quite outdated. I am trying to update soon.Intro Why degrade Why fast Why ATP Proteolytic systems Wilkinson...Searches on metabolites from carbohydrate, amino acid, fatty acid, nucleotide or other biochemical metabolism, including descriptions of the chemistry and function of biochemicals.
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Letters from Terra Metabolite Database The main compulsion for the creation of this site was the desire to create something that was actually of some use in asp; there are few things more frustrating than being enthused by a new...Metabolic pathway analysis webservice, including shortest, alternate path and network analysis from Cologne University Bioinformatics Center, Germany.
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Pathway Hunter Tool (PHT) If your browser does not maintain forwarding click onto the picture. Click here to load PHT...Digitized version of wall charts courtesy Boehringer Mannheim et al, divided into Metabolic Pathways and Cellular and Molecular Processes, maintained by the Swiss Institute of Bioinformatics, Geneva, Switzerland.
http://www.expasy.org/cgi-bin/search-biochem-index
A company that intends to use metabolic profiling ('metabolomics') for the discovery and development of drugs and diagnostic markers.
http://www.metabolon.com/
Research-oriented biotech company; website offers illustrations and charts of pathways in metabolism, signal transduction, and immunology.
http://www.biocarta.com/genes/allpathways.asp
A comprehensive collection of illustrated lecture notes on medical biochemistry. (Very good content, a bit lacking in presentation.)
http://web.indstate.edu/thcme/mwking/home.html
Flow chart of liver metabolism. Mousing over the chart will display explanations of pathways and enzyme reaction in pop-up windows (requires JavaScript).
http://www.bmb.leeds.ac.uk/teaching/icu3/metabol/
Database of metabolite structures and related enzyme reactions. Requires Java.
http://www.metabolome.jp/index.html
Text and illustrations on human metabolism. Covers pathways, hormonal regulation, and some discussion of medical correlations such as diabetes and favism.
http://science.uwaterloo.ca/%7empalmer/MetabolismNotes/
Discusses the conversion of glucose and other monosaccharids to lactate or other metabolites, depending on the organism.
http://www.beechtreecommon.org/biochemistry/